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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796068.1_cds_XP_016447386.1_4136
CDS Infomation

[gene=LOC107772397] [db_xref=GeneID:107772397] [protein=probable polygalacturonase At3g15720] [protein_id=XP_016447386.1] [location=complement(join(63974..64201,64528..64644,64775..64880,64972..65053,65362..65569,65650..65673,65782..65958,66259..66396,66557..66682,67135..67164))] [gbkey=CDS]
Sequence

ATGGTTCTTTTACTAGCTGGTACTACAATGGTTTACTTGGGAATTTTCTTGGTTTTGTTG
TGCATGTTTTCTCCTGTATGGAGTGCTGACGACATTAAAACTTTCAATGTCGTGAATTTT
GGGGCAGTCGGAGACGGAAGAACGGATGATCTCCCAGCTTTCCTCAAGGCATGGGAAACT
GTCTGTCAATCGGAGTCGAGTCGTGTAATTCTTGTTATACCAGAAAAAAAGAAATTCTTA
CTGACGCCTTCAACATTTGAGGGTCCTTGCAAACCCTCTTTTATCCATATTCAGGTATCA
GGAAATATAATTGCACCTAACTCAAAATCGGGATGGGATGGACGTGCAACCAATGCATGG
CTCATTTTCGAGAATATCGACCATCTTACTGTTAATGGAAATGGAGTTTTTGACGGCCAA
GGCCATGTATGGTGGTCTAATCCTTGCTTGGATGATAACAACCCATCCCAAGAAACACAA
TGCAAAGGACCAACTGCATTGATTTTCAGACGATGCGACCGACTTCGAGTTTGGGGAGTA
ACGCTTATTAGAAGCGCTAGAAGTCATATCATATTGACTGCTTGCAATGAAGTTAGCATC
GCTAATATTCGTATTATGTCCCCCGGTGACAGTCCCAACACCGATGGGATAGACGTTTCC
GCTAGCACAAACGTACGAATACACAACTCTCTCATTGCCACAGGCGATGACTGTATTGCA
ATAGGAGGAGGATCGTCCAATGTCAATATAAGCGGCATAACATGCGGACCAGGCCATGGT
ATTAGTATTGGATCCTTGGGAGAAGGAGGATTTGAAATTGTGGAAGATGTGCGCGTACGA
AATTGCACGATTAAAGACACCTTAACAGGAGTAAGAATTAAGACCTGGCAGGGAGGCAAA
GGGTATGCAAGGAGGATCACTTTTGAAGGAATAAAATTGGTTGCAGTCAACAATCCCATC
ATCATCGACCAATTTTACTGCCCCAGCCGAGTCAATTGCAAAAATGATACAGCTGCAGTT
GCATTGAGCGACATAGCATTCAGAGGAATATCAGGGACTTCCCTGATGGACGAGGTGATA
AATCTGAGCTGCAGCGAAACTGTTGGCTGCAAAAACATACTTGTCGATCATGTGTATATA
TCATCTGTTAAGGGTAACCCTGTTCATGCCAAGTGCGTTAATGCTCATGGAAGACACACT
CATACTAGGCCTGTTGTGAACTGTCTGCTGCCATAG

Peptide Sequence

PEP ID

XP_016447386.1
PEP Infomation

PREDICTED: probable polygalacturonase At3g15720 [Nicotiana tabacum]
Sequence

MVLLLAGTTMVYLGIFLVLLCMFSPVWSADDIKTFNVVNFGAVGDGRTDDLPAFLKAWET
VCQSESSRVILVIPEKKKFLLTPSTFEGPCKPSFIHIQVSGNIIAPNSKSGWDGRATNAW
LIFENIDHLTVNGNGVFDGQGHVWWSNPCLDDNNPSQETQCKGPTALIFRRCDRLRVWGV
TLIRSARSHIILTACNEVSIANIRIMSPGDSPNTDGIDVSASTNVRIHNSLIATGDDCIA
IGGGSSNVNISGITCGPGHGISIGSLGEGGFEIVEDVRVRNCTIKDTLTGVRIKTWQGGK
GYARRITFEGIKLVAVNNPIIIDQFYCPSRVNCKNDTAAVALSDIAFRGISGTSLMDEVI
NLSCSETVGCKNILVDHVYISSVKGNPVHAKCVNAHGRHTHTRPVVNCLLP

Transcript Sequence

Gene sequence data has not been registered.